GARANT

General algorithm for resonance assignment

GARANT is an algorithm for automatic resonance assignment using as input the primary structure of a protein and lists with observed cross peaks from various spectra; knowledge about magnetization transfer pathways in the NMR experiments used is read from a library. The basic concept of GARANT is the matching of observed cross peaks to expected cross peaks derived from the sequence and the magnetization transfer pathways.

Availability

• GARANT is available free-of-charge to all users who agree with the copyright and legal information.

References

• Bartels, C., Güntert, P., Billeter, M. & Wüthrich, K. GARANT-A general algorithm for resonance assignment of multidimensional nuclear magnetic resonance spectra. J. Comp. Chem. 18, 139–149 (1997)

Any reports or publications of results obtained with GARANT must cite this paper.

• Bartels, C., Billeter, M., Güntert, P. & Wüthrich, K. Automated sequence-specific NMR assignment of homologous proteins using the program GARANT. J. Biomol. NMR 7, 207–213 (1996)